diff --git a/applications/conv_diff_reac/CMakeLists.txt b/applications/conv_diff_reac/CMakeLists.txt deleted file mode 100644 index 96414f579e57e8708d617d0de3c27a8a8f2cf2de..0000000000000000000000000000000000000000 --- a/applications/conv_diff_reac/CMakeLists.txt +++ /dev/null @@ -1,11 +0,0 @@ -dune_add_formcompiler_system_test(UFLFILE cdr_ernupwind.ufl - BASENAME app_cdr_ernupwind - INIFILE cdr_ernupwind.mini - NO_TESTS - ) - -dune_add_formcompiler_system_test(UFLFILE cdr_ernupwind.ufl - BASENAME verify_app_cdr_ernupwind - INIFILE verify_ernupwind.mini - NO_TESTS - ) diff --git a/applications/conv_diff_reac/cdr_condupwind.mini b/applications/conv_diff_reac/cdr_condupwind.mini deleted file mode 100644 index c326e64ca611aec3a8b0badd83110c99ad1dad4b..0000000000000000000000000000000000000000 --- a/applications/conv_diff_reac/cdr_condupwind.mini +++ /dev/null @@ -1,51 +0,0 @@ -__name = app_nonlinear_conv_diff_condupwind_{__exec_suffix} -__exec_suffix = deg{formcompiler.ufl_variants.degree}_{opcount_suffix}_level{formcompiler.instrumentation_level} - -opcount_suffix = opcount, nonopcount | expand opcount -{opcount_suffix} == opcount and {formcompiler.instrumentation_level} != 4 | exclude - -# Calculate the size of the grid to equlibritate it to 100 MB/rank -# Input parameters -dim = 3 -mbperrank = 100 -ranks = 16 -floatingbytes = 8 - -# Metaini Calculations -memperrank = {mbperrank} * 1048576 | eval -dofsperdir = {formcompiler.ufl_variants.degree} + 1 | eval -celldofs = {dofsperdir} ** {dim} | eval -cellsperrank = {memperrank} / ({floatingbytes} * {celldofs}) | eval -cellsperdir = {cellsperrank} ** (1/{dim}) | eval | toint -firstdircells = {ranks} * {cellsperdir} | eval -dimminusone = {dim} - 1 | eval -ones = 1 | repeat {dimminusone} -otherdircells = {cellsperdir} | repeat {dimminusone} - -# Setup the grid! -extension = 1.0 | repeat {dim} -cells = {firstdircells} {otherdircells} -partitioning = {ranks} {ones} - -# Set up the timing identifier -identifier = nonlinear_convdiff_condupwind_deg{formcompiler.ufl_variants.degree} - -[wrapper.vtkcompare] -name = {__name} -extension = vtu - -[formcompiler] -fastdg = 1 -sumfact = 1 -vectorize_quad = 1 -vectorize_grads = 1 -instrumentation_level = 2, 3, 4 | expand -opcounter = 1, 0 | expand opcount -time_opcounter = 0, 1 | expand opcount -exact_solution_expression = g -compare_l2errorsquared = 1e-6 -quadrature_order = {formcompiler.ufl_variants.degree} * 2 | eval - -[formcompiler.ufl_variants] -cell = hexahedron -degree = 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 | expand diff --git a/applications/conv_diff_reac/cdr_condupwind.ufl b/applications/conv_diff_reac/cdr_condupwind.ufl deleted file mode 100644 index 0071766cb4bff3bb787879b29c555fc6743cd89b..0000000000000000000000000000000000000000 --- a/applications/conv_diff_reac/cdr_condupwind.ufl +++ /dev/null @@ -1,37 +0,0 @@ -dim = 3 -x = SpatialCoordinate(cell) - -g = x[0]*x[0] + x[1]*x[1] + x[2]*x[2] -I = Identity(3) -A = as_matrix([[x[i]*x[j] + I[i,j] for j in range(3)] for i in range(3)]) -f = -6. -c = 5. -b = x - -V = FiniteElement("DG", cell, degree) - -u = TrialFunction(V) -v = TestFunction(V) - -n = FacetNormal(cell)('+') - -alpha = 3.0 -h_ext = CellVolume(cell) / FacetArea(cell) -cse_gamma_ext = (alpha * degree * (degree + dim - 1)) / h_ext -h_int = Min(CellVolume(cell)('+'), CellVolume(cell)('-')) / FacetArea(cell) -cse_gamma_int = (alpha * degree * (degree + dim - 1)) / h_int -upwind = conditional(inner(b, n) > 0, u('+'), u('-')) - -theta = -1.0 - -r = (inner(A*grad(u) - b*u, grad(v)) + (c*u-f)*v)*dx \ - + (inner(n, A*avg(grad(u))) + inner(b*upwind, n))*jump(v)*dS \ - + cse_gamma_int*jump(u)*jump(v)*dS \ - - theta*jump(u)*inner(A*avg(grad(v)), n)*dS \ - - inner(n, A*grad(u) + b*u)*v*ds \ - + cse_gamma_ext*u*v*ds \ - + theta*u*inner(A*grad(v), n)*ds \ - - theta*g*inner(A*grad(v), n)*ds \ - - cse_gamma_ext*g*v*ds - -forms = [r] diff --git a/applications/conv_diff_reac/cdr_ernupwind.mini b/applications/conv_diff_reac/cdr_ernupwind.mini deleted file mode 100644 index 40638c1159d4747e2cf788c32fd45e11413e02ae..0000000000000000000000000000000000000000 --- a/applications/conv_diff_reac/cdr_ernupwind.mini +++ /dev/null @@ -1,51 +0,0 @@ -__name = app_nonlinear_conv_diff_ernupwind_{__exec_suffix} -__exec_suffix = deg{formcompiler.ufl_variants.degree}_{opcount_suffix}_level{formcompiler.instrumentation_level} - -opcount_suffix = opcount, nonopcount | expand opcount -{opcount_suffix} == opcount and {formcompiler.instrumentation_level} != 4 | exclude - -# Calculate the size of the grid to equlibritate it to 100 MB/rank -# Input parameters -dim = 3 -mbperrank = 100 -ranks = 16 -floatingbytes = 8 - -# Metaini Calculations -memperrank = {mbperrank} * 1048576 | eval -dofsperdir = {formcompiler.ufl_variants.degree} + 1 | eval -celldofs = {dofsperdir} ** {dim} | eval -cellsperrank = {memperrank} / ({floatingbytes} * {celldofs}) | eval -cellsperdir = {cellsperrank} ** (1/{dim}) | eval | toint -firstdircells = {ranks} * {cellsperdir} | eval -dimminusone = {dim} - 1 | eval -ones = 1 | repeat {dimminusone} -otherdircells = {cellsperdir} | repeat {dimminusone} - -# Setup the grid! -extension = 1.0 | repeat {dim} -cells = {firstdircells} {otherdircells} -partitioning = {ranks} {ones} - -# Set up the timing identifier -identifier = nonlinear_convdiff_ernupwind_deg{formcompiler.ufl_variants.degree} - -[wrapper.vtkcompare] -name = {__name} -extension = vtu - -[formcompiler] -fastdg = 1 -sumfact = 1 -vectorize_quad = 1 -vectorize_grads = 1 -instrumentation_level = 2, 3, 4 | expand -opcounter = 1, 0 | expand opcount -time_opcounter = 0, 1 | expand opcount -exact_solution_expression = g -compare_l2errorsquared = 1e-6 -quadrature_order = {formcompiler.ufl_variants.degree} * 2 | eval - -[formcompiler.ufl_variants] -cell = hexahedron -degree = 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 | expand diff --git a/applications/conv_diff_reac/cdr_ernupwind.ufl b/applications/conv_diff_reac/cdr_ernupwind.ufl deleted file mode 100644 index 6e1763f521cf7fdfb8b22bf6730f0eb732eb811f..0000000000000000000000000000000000000000 --- a/applications/conv_diff_reac/cdr_ernupwind.ufl +++ /dev/null @@ -1,38 +0,0 @@ -dim = 3 -x = SpatialCoordinate(cell) - -g = x[0]*x[0] + x[1]*x[1] + x[2]*x[2] -I = Identity(3) -A = as_matrix([[x[i]*x[j] + I[i,j] for j in range(3)] for i in range(3)]) -f = -6. -c = 5. -b = x - -V = FiniteElement("DG", cell, degree) - -u = TrialFunction(V) -v = TestFunction(V) - -n = FacetNormal(cell)('+') - -alpha = 3.0 -h_ext = CellVolume(cell) / FacetArea(cell) -cse_gamma_ext = (alpha * degree * (degree + dim - 1)) / h_ext -h_int = Min(CellVolume(cell)('+'), CellVolume(cell)('-')) / FacetArea(cell) -cse_gamma_int = (alpha * degree * (degree + dim - 1)) / h_int - -theta = -1.0 - -r = (inner(A*grad(u) - b*u, grad(v)) + (c*u-f)*v)*dx \ - + inner(n, A*avg(grad(u)))*jump(v)*dS \ - - (avg(u) - 0.5*jump(u))*inner(b, n)*jump(v)*dS \ - + cse_gamma_int*jump(u)*jump(v)*dS \ - - theta*jump(u)*inner(A*avg(grad(v)), n)*dS \ - - inner(n, A*grad(u) + b*g)*v*ds \ - + cse_gamma_ext*u*v*ds \ - + theta*u*inner(A*grad(v), n)*ds \ - - theta*g*inner(A*grad(v), n)*ds \ - - cse_gamma_ext*g*v*ds - - -forms = [r] diff --git a/applications/conv_diff_reac/verify_ernupwind.mini b/applications/conv_diff_reac/verify_ernupwind.mini deleted file mode 100644 index 531b23ad761ea68ae69b5677c4c1fc0758c2de5c..0000000000000000000000000000000000000000 --- a/applications/conv_diff_reac/verify_ernupwind.mini +++ /dev/null @@ -1,21 +0,0 @@ -__name = verify_app_cdr_ernupwind - -# Setup the grid! -extension = 1.0 1.0 1.0 -cells = 8 8 8 - -[wrapper.vtkcompare] -name = {__name} -extension = vtu - -[formcompiler] -fastdg = 1 -sumfact = 1 -vectorize_quad = 1 -vectorize_grads = 1 -exact_solution_expression = g -compare_l2errorsquared = 1e-6 - -[formcompiler.ufl_variants] -cell = hexahedron -degree = 2