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This is an archived project. Repository and other project resources are read-only.
Show more breadcrumbs
Christian Heinigk
dune-codegen
Commits
91ff1e2a
Commit
91ff1e2a
authored
7 years ago
by
Dominic Kempf
Browse files
Options
Downloads
Patches
Plain Diff
Move timings stuff to separate module
Conflicts: python/dune/perftool/pdelab/driver/taskbased.py
parent
ee4ac8c3
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2
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2 changed files
python/dune/perftool/pdelab/driver/__init__.py
+9
-168
9 additions, 168 deletions
python/dune/perftool/pdelab/driver/__init__.py
python/dune/perftool/pdelab/driver/timings.py
+198
-0
198 additions, 0 deletions
python/dune/perftool/pdelab/driver/timings.py
with
207 additions
and
168 deletions
python/dune/perftool/pdelab/driver/__init__.py
+
9
−
168
View file @
91ff1e2a
...
...
@@ -55,6 +55,10 @@ def get_trial_element():
return
_driver_data
[
'
form
'
].
coefficients
()[
0
].
ufl_element
()
def
get_formdata
():
return
_driver_data
[
'
formdata
'
]
def
is_stationary
():
return
'
mass_form
'
not
in
_driver_data
...
...
@@ -181,7 +185,7 @@ def name_initree():
@preamble
def
define_dimension
(
name
):
return
"
static const int {} = {};
"
.
format
(
name
,
get_dimension
)
return
"
static const int {} = {};
"
.
format
(
name
,
get_dimension
()
)
def
name_dimension
():
...
...
@@ -303,6 +307,7 @@ def type_domainfield():
def
basetype_range
():
if
get_option
(
'
opcounter
'
):
from
dune.perftool.pdelab.driver.timings
import
setup_timer
setup_timer
()
return
"
oc::OpCounter<double>
"
else
:
...
...
@@ -1176,35 +1181,6 @@ def name_mpihelper():
return
name
@preamble
def
define_timing_stream
(
name
):
include_file
(
'
fstream
'
,
filetag
=
'
driver
'
,
system
=
True
)
include_file
(
'
sstream
'
,
filetag
=
'
driver
'
,
system
=
True
)
include_file
(
'
sys/types.h
'
,
filetag
=
'
driver
'
,
system
=
True
)
include_file
(
'
unistd.h
'
,
filetag
=
'
driver
'
,
system
=
True
)
return
[
"
std::stringstream ss;
"
,
"
ss <<
\"
{}/timings-rank-
\"
<< {}.rank() <<
\"
-pid-
\"
<< getpid() <<
\"
.csv
\"
;
"
.
format
(
get_option
(
'
project_basedir
'
),
name_mpihelper
()),
"
std::ofstream {};
"
.
format
(
name
),
"
{}.open(ss.str(), std::ios_base::app);
"
.
format
(
name
),
]
@preamble
def
dump_dof_numbers
(
stream
):
ident
=
name_timing_identifier
()
return
"
{} << {} <<
\"
dofs dofs
\"
<< {}.size() << std::endl;
"
.
format
(
stream
,
ident
,
name_gfs
(
get_trial_element
()))
def
name_timing_stream
():
name
=
"
timestream
"
define_timing_stream
(
name
)
dump_dof_numbers
(
name
)
return
name
@preamble
def
dune_solve
():
# Test if form is linear in ansatzfunction
...
...
@@ -1237,6 +1213,7 @@ def dune_solve():
solve
=
"
{}.apply();
"
.
format
(
snp
)
if
get_option
(
'
instrumentation_level
'
)
>=
2
:
from
dune.perftool.pdelab.driver.timings
import
setup_timer
,
name_timing_stream
setup_timer
()
from
dune.perftool.generation
import
post_include
post_include
(
"
HP_DECLARE_TIMER(solve);
"
,
filetag
=
"
driver
"
)
...
...
@@ -1438,144 +1415,6 @@ def name_test_fail_variable():
return
name
@cached
def
setup_timer
():
# Necessary includes and defines
from
dune.perftool.generation
import
pre_include
# TODO check that we are using YASP?
if
get_option
(
'
opcounter
'
):
pre_include
(
"
#define ENABLE_COUNTER
"
,
filetag
=
"
driver
"
)
pre_include
(
"
#define ENABLE_HP_TIMERS
"
,
filetag
=
"
driver
"
)
include_file
(
"
dune/perftool/common/timer.hh
"
,
filetag
=
"
driver
"
)
@preamble
def
define_timing_identifier
(
name
):
ini
=
name_initree
()
return
"
auto {} = {}.get<std::string>(
\"
identifier
\"
, std::string(argv[0]));
"
.
format
(
name
,
ini
)
def
name_timing_identifier
():
name
=
"
ident
"
define_timing_identifier
(
name
)
return
name
@preamble
def
evaluate_residual_timer
():
formdata
=
_driver_data
[
'
formdata
'
]
n_go
=
name_gridoperator
(
formdata
)
v
=
name_vector
(
formdata
)
t_v
=
type_vector
(
formdata
)
setup_timer
()
if
get_option
(
'
instrumentation_level
'
)
>=
2
:
# Write back times
from
dune.perftool.generation
import
post_include
post_include
(
"
HP_DECLARE_TIMER(residual_evaluation);
"
,
filetag
=
"
driver
"
)
timestream
=
name_timing_stream
()
print_times
=
[]
from
dune.perftool.generation
import
get_global_context_value
formdatas
=
get_global_context_value
(
"
formdatas
"
)
for
formdata
in
formdatas
:
lop_name
=
name_localoperator
(
formdata
)
if
get_option
(
'
instrumentation_level
'
)
>=
3
:
print_times
.
append
(
"
{}.dump_timers({}, {}, true);
"
.
format
(
lop_name
,
timestream
,
name_timing_identifier
()))
if
get_option
(
'
instrumentation_level
'
)
>=
2
:
evaluation
=
[
"
HP_TIMER_START(residual_evaluation);
"
,
"
{}.residual({}, r);
"
.
format
(
n_go
,
v
),
"
HP_TIMER_STOP(residual_evaluation);
"
,
"
DUMP_TIMER(residual_evaluation, {}, true);
"
.
format
(
timestream
)]
evaluation
.
extend
(
print_times
)
else
:
evaluation
=
[
"
{}.residual({}, r);
"
.
format
(
n_go
,
v
)]
evaluation
=
[
"
{} r({});
"
.
format
(
t_v
,
v
),
"
r=0.0;
"
]
+
evaluation
return
evaluation
@preamble
def
apply_jacobian_timer
():
# Set the matrix_free option to True!
from
dune.perftool.options
import
set_option
set_option
(
"
matrix_free
"
,
True
)
formdata
=
_driver_data
[
'
formdata
'
]
n_go
=
name_gridoperator
(
formdata
)
v
=
name_vector
(
formdata
)
t_v
=
type_vector
(
formdata
)
setup_timer
()
if
get_option
(
'
instrumentation_level
'
)
>=
2
:
# Write back times
from
dune.perftool.generation
import
post_include
post_include
(
"
HP_DECLARE_TIMER(apply_jacobian);
"
,
filetag
=
"
driver
"
)
timestream
=
name_timing_stream
()
print_times
=
[]
from
dune.perftool.generation
import
get_global_context_value
formdatas
=
get_global_context_value
(
"
formdatas
"
)
for
formdata
in
formdatas
:
lop_name
=
name_localoperator
(
formdata
)
if
get_option
(
'
instrumentation_level
'
)
>=
3
:
print_times
.
append
(
"
{}.dump_timers({}, {}, true);
"
.
format
(
lop_name
,
timestream
,
name_timing_identifier
()))
if
get_option
(
'
instrumentation_level
'
)
>=
2
:
evaluation
=
[
"
HP_TIMER_START(apply_jacobian);
"
,
"
{}.jacobian_apply({}, j);
"
.
format
(
n_go
,
v
),
"
HP_TIMER_STOP(apply_jacobian);
"
,
"
DUMP_TIMER(apply_jacobian, {}, true);
"
.
format
(
timestream
)]
evaluation
.
extend
(
print_times
)
else
:
evaluation
=
[
"
{}.jacobian_apply({}, j);
"
.
format
(
n_go
,
v
)]
evaluation
=
[
"
{} j({});
"
.
format
(
t_v
,
v
),
"
j=0.0;
"
]
+
evaluation
return
evaluation
@preamble
def
assemble_matrix_timer
():
formdata
=
_driver_data
[
'
formdata
'
]
t_go
=
type_gridoperator
(
formdata
)
n_go
=
name_gridoperator
(
formdata
)
v
=
name_vector
(
formdata
)
t_v
=
type_vector
(
formdata
)
setup_timer
()
if
get_option
(
'
instrumentation_level
'
)
>=
2
:
# Write back times
from
dune.perftool.generation
import
post_include
post_include
(
"
HP_DECLARE_TIMER(matrix_assembly);
"
,
filetag
=
"
driver
"
)
timestream
=
name_timing_stream
()
print_times
=
[]
from
dune.perftool.generation
import
get_global_context_value
formdatas
=
get_global_context_value
(
"
formdatas
"
)
for
formdata
in
formdatas
:
lop_name
=
name_localoperator
(
formdata
)
if
get_option
(
'
instrumentation_level
'
)
>=
3
:
print_times
.
append
(
"
{}.dump_timers({}, {}, true);
"
.
format
(
lop_name
,
timestream
,
name_timing_identifier
()))
if
get_option
(
'
instrumentation_level
'
)
>=
2
:
assembly
=
[
"
HP_TIMER_START(matrix_assembly);
"
,
"
{}.jacobian({},m);
"
.
format
(
n_go
,
v
),
"
HP_TIMER_STOP(matrix_assembly);
"
,
"
DUMP_TIMER(matrix_assembly, {}, true);
"
.
format
(
timestream
)]
assembly
.
extend
(
print_times
)
else
:
assembly
=
[
"
{}.jacobian({},m);
"
.
format
(
n_go
,
v
)]
assembly
=
[
"
using M = typename {}::Traits::Jacobian;
"
.
format
(
t_go
),
"
M m({});
"
.
format
(
n_go
)]
+
assembly
return
assembly
@preamble
def
print_residual
():
ini
=
name_initree
()
...
...
@@ -1840,6 +1679,7 @@ def generate_driver(formdatas, data):
[
"
vertex
"
,
"
interval
"
,
"
quadrilateral
"
,
"
hexahedron
"
]))
# In case of operator conunting we only assemble the matrix and evaluate the residual
# assemble_matrix_timer()
from
dune.perftool.pdelab.driver.timings
import
apply_jacobian_timer
,
evaluate_residual_timer
evaluate_residual_timer
()
apply_jacobian_timer
()
elif
is_stationary
():
...
...
@@ -1850,6 +1690,7 @@ def generate_driver(formdatas, data):
# Make sure that timestream is declared before retrieving chache items
if
get_option
(
"
instrumentation_level
"
)
>=
1
:
from
dune.perftool.pdelab.driver.timings
import
setup_timer
,
name_timing_stream
setup_timer
()
timestream
=
name_timing_stream
()
...
...
This diff is collapsed.
Click to expand it.
python/dune/perftool/pdelab/driver/timings.py
0 → 100644
+
198
−
0
View file @
91ff1e2a
"""
Timing related generator functions
"""
from
dune.perftool.options
import
get_option
,
set_option
from
dune.perftool.generation
import
(
cached
,
include_file
,
post_include
,
preamble
,
)
@preamble
def
define_timing_identifier
(
name
):
from
dune.perftool.pdelab.driver
import
name_initree
ini
=
name_initree
()
return
"
auto {} = {}.get<std::string>(
\"
identifier
\"
, std::string(argv[0]));
"
.
format
(
name
,
ini
)
def
name_timing_identifier
():
name
=
"
ident
"
define_timing_identifier
(
name
)
return
name
@preamble
def
dump_dof_numbers
(
stream
):
ident
=
name_timing_identifier
()
from
dune.perftool.pdelab.driver
import
get_trial_element
,
name_gfs
return
"
{} << {} <<
\"
dofs dofs
\"
<< {}.size() << std::endl;
"
.
format
(
stream
,
ident
,
name_gfs
(
get_trial_element
()))
@preamble
def
define_timing_stream
(
name
):
from
dune.perftool.pdelab.driver
import
name_mpihelper
include_file
(
'
fstream
'
,
filetag
=
'
driver
'
,
system
=
True
)
include_file
(
'
sstream
'
,
filetag
=
'
driver
'
,
system
=
True
)
include_file
(
'
sys/types.h
'
,
filetag
=
'
driver
'
,
system
=
True
)
include_file
(
'
unistd.h
'
,
filetag
=
'
driver
'
,
system
=
True
)
return
[
"
std::stringstream ss;
"
,
"
ss <<
\"
{}/timings-rank-
\"
<< {}.rank() <<
\"
-pid-
\"
<< getpid() <<
\"
.csv
\"
;
"
.
format
(
get_option
(
'
project_basedir
'
),
name_mpihelper
()),
"
std::ofstream {};
"
.
format
(
name
),
"
{}.open(ss.str(), std::ios_base::app);
"
.
format
(
name
),
]
def
name_timing_stream
():
name
=
"
timestream
"
define_timing_stream
(
name
)
dump_dof_numbers
(
name
)
return
name
@cached
def
setup_timer
():
# Necessary includes and defines
from
dune.perftool.generation
import
pre_include
# TODO check that we are using YASP?
if
get_option
(
'
opcounter
'
):
pre_include
(
"
#define ENABLE_COUNTER
"
,
filetag
=
"
driver
"
)
pre_include
(
"
#define ENABLE_HP_TIMERS
"
,
filetag
=
"
driver
"
)
include_file
(
"
dune/perftool/common/timer.hh
"
,
filetag
=
"
driver
"
)
@preamble
def
evaluate_residual_timer
():
from
dune.perftool.pdelab.driver
import
(
get_formdata
,
name_gridoperator
,
name_localoperator
,
name_vector
,
type_vector
,
)
formdata
=
get_formdata
()
n_go
=
name_gridoperator
(
formdata
)
v
=
name_vector
(
formdata
)
t_v
=
type_vector
(
formdata
)
setup_timer
()
if
get_option
(
'
instrumentation_level
'
)
>=
2
:
# Write back times
from
dune.perftool.generation
import
post_include
post_include
(
"
HP_DECLARE_TIMER(residual_evaluation);
"
,
filetag
=
"
driver
"
)
timestream
=
name_timing_stream
()
print_times
=
[]
from
dune.perftool.generation
import
get_global_context_value
formdatas
=
get_global_context_value
(
"
formdatas
"
)
for
formdata
in
formdatas
:
lop_name
=
name_localoperator
(
formdata
)
if
get_option
(
'
instrumentation_level
'
)
>=
3
:
print_times
.
append
(
"
{}.dump_timers({}, {}, true);
"
.
format
(
lop_name
,
timestream
,
name_timing_identifier
()))
if
get_option
(
'
instrumentation_level
'
)
>=
2
:
evaluation
=
[
"
HP_TIMER_START(residual_evaluation);
"
,
"
{}.residual({}, r);
"
.
format
(
n_go
,
v
),
"
HP_TIMER_STOP(residual_evaluation);
"
,
"
DUMP_TIMER(residual_evaluation, {}, true);
"
.
format
(
timestream
)]
evaluation
.
extend
(
print_times
)
else
:
evaluation
=
[
"
{}.residual({}, r);
"
.
format
(
n_go
,
v
)]
evaluation
=
[
"
{} r({});
"
.
format
(
t_v
,
v
),
"
r=0.0;
"
]
+
evaluation
return
evaluation
@preamble
def
apply_jacobian_timer
():
# Set the matrix_free option to True!
set_option
(
"
matrix_free
"
,
True
)
from
dune.perftool.pdelab.driver
import
(
get_formdata
,
name_gridoperator
,
name_localoperator
,
name_vector
,
type_vector
,
)
formdata
=
get_formdata
()
n_go
=
name_gridoperator
(
formdata
)
v
=
name_vector
(
formdata
)
t_v
=
type_vector
(
formdata
)
setup_timer
()
if
get_option
(
'
instrumentation_level
'
)
>=
2
:
# Write back times
from
dune.perftool.generation
import
post_include
post_include
(
"
HP_DECLARE_TIMER(apply_jacobian);
"
,
filetag
=
"
driver
"
)
timestream
=
name_timing_stream
()
print_times
=
[]
from
dune.perftool.generation
import
get_global_context_value
formdatas
=
get_global_context_value
(
"
formdatas
"
)
for
formdata
in
formdatas
:
lop_name
=
name_localoperator
(
formdata
)
if
get_option
(
'
instrumentation_level
'
)
>=
3
:
print_times
.
append
(
"
{}.dump_timers({}, {}, true);
"
.
format
(
lop_name
,
timestream
,
name_timing_identifier
()))
if
get_option
(
'
instrumentation_level
'
)
>=
2
:
evaluation
=
[
"
HP_TIMER_START(apply_jacobian);
"
,
"
{}.jacobian_apply({}, j);
"
.
format
(
n_go
,
v
),
"
HP_TIMER_STOP(apply_jacobian);
"
,
"
DUMP_TIMER(apply_jacobian, {}, true);
"
.
format
(
timestream
)]
evaluation
.
extend
(
print_times
)
else
:
evaluation
=
[
"
{}.jacobian_apply({}, j);
"
.
format
(
n_go
,
v
)]
evaluation
=
[
"
{} j({});
"
.
format
(
t_v
,
v
),
"
j=0.0;
"
]
+
evaluation
return
evaluation
@preamble
def
assemble_matrix_timer
():
from
dune.perftool.pdelab.driver
import
(
get_formdata
,
name_gridoperator
,
name_localoperator
,
name_vector
,
type_vector
,
)
formdata
=
get_formdata
()
t_go
=
type_gridoperator
(
formdata
)
n_go
=
name_gridoperator
(
formdata
)
v
=
name_vector
(
formdata
)
t_v
=
type_vector
(
formdata
)
setup_timer
()
if
get_option
(
'
instrumentation_level
'
)
>=
2
:
# Write back times
from
dune.perftool.generation
import
post_include
post_include
(
"
HP_DECLARE_TIMER(matrix_assembly);
"
,
filetag
=
"
driver
"
)
timestream
=
name_timing_stream
()
print_times
=
[]
from
dune.perftool.generation
import
get_global_context_value
formdatas
=
get_global_context_value
(
"
formdatas
"
)
for
formdata
in
formdatas
:
lop_name
=
name_localoperator
(
formdata
)
if
get_option
(
'
instrumentation_level
'
)
>=
3
:
print_times
.
append
(
"
{}.dump_timers({}, {}, true);
"
.
format
(
lop_name
,
timestream
,
name_timing_identifier
()))
if
get_option
(
'
instrumentation_level
'
)
>=
2
:
assembly
=
[
"
HP_TIMER_START(matrix_assembly);
"
,
"
{}.jacobian({},m);
"
.
format
(
n_go
,
v
),
"
HP_TIMER_STOP(matrix_assembly);
"
,
"
DUMP_TIMER(matrix_assembly, {}, true);
"
.
format
(
timestream
)]
assembly
.
extend
(
print_times
)
else
:
assembly
=
[
"
{}.jacobian({},m);
"
.
format
(
n_go
,
v
)]
assembly
=
[
"
using M = typename {}::Traits::Jacobian;
"
.
format
(
t_go
),
"
M m({});
"
.
format
(
n_go
)]
+
assembly
return
assembly
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